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Hi Ben,
Checking for index fragmentation is a very resource-intensive activity. For this reason, SQL Monitor only checks for fragmented indexes once a week: on Sunday at 01:00 (by default).This means that an alert may remain Active for some time after you fix the issue, and will only be updated after the next scheduled weekly check.
https://documentation.red-gate.com/sm13/list-of-alerts-195789424.html#Listofalerts-Fragmentedindexes
There is a way to change when this runs (if you had other processes, scans etc happening in your environment that were consuming resource) but at present there isn't a way to increase frequency.
I would suggest raising this request on the UserVoice site, votes on these suggestions can help prioritise future features!
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Is there any way for me to make them more frequently checked?